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  5. AGT25737

AGT25737 (N559_4111)


Aliases : N559_4111

Description : high-affinity branched-chain amino acid transport [Ensembl].


Gene families : OG_02_0001160 (OrthoFinder) Phylogenetic Tree(s): OG0001160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25737
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAK99465 spr0661, livM ABC transporter membrane-spanning permease-branched... 0.03 OrthoFinder
AGT23713 N559_1985 high-affinity branched-chain amino acid transport [Ensembl]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 35 323
No external refs found!