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  5. AGT25849

AGT25849 (N559_4227)


Aliases : N559_4227

Description : undecaprenyl pyrophosphate synthase [Ensembl].


Gene families : OG_02_0000379 (OrthoFinder) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25849
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AAC73285 uppS, b0174 undecaprenyl pyrophosphate synthase [Ensembl]. Putative... 0.08 OrthoFinder
AAK99044 spr0240, uppS Undecaprenyl diphosphate synthase [Ensembl]. Putative... 0.03 OrthoFinder
AAL19185 STM0221, uppS undecaprenyl pyrophosphate synthetase (di-trans,... 0.15 OrthoFinder
CBI65821 uppS, HPB8_264 undecaprenyl pyrophosphate synthetase [Ensembl].... 0.02 OrthoFinder
CCG26972 No alias Undecaprenyl diphosphate synthase [Ensembl]. Putative... 0.02 OrthoFinder
CCL18521 uppS, BN171_2410003 Undecaprenyl pyrophosphate synthetase [Ensembl].... 0.04 OrthoFinder
CPC35219 uppS, ERS093114_00164 Di-trans%2Cpoly-cis-decaprenylcistransferase [Ensembl].... 0.05 OrthoFinder
CRO13815 ispU Ditrans,polycis-undecaprenyl-diphosphate synthase... 0.04 OrthoFinder
EDJ91707 CGSHi22421_08128 hypothetical protein [Ensembl]. Putative undecaprenyl... 0.04 OrthoFinder
EDJ91708 lpxD, CGSHi22421_08133 UDP-3-O-[3-hydroxymyristoyl] glucosamine... 0.03 OrthoFinder
KNA51797 VCV51_033541 di-trans,poly-cis-decaprenylcistransferase [Ensembl].... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1904680 peptide transmembrane transporter activity IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001441 UPP_synth-like 29 249
No external refs found!