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  5. AGT25964

AGT25964 (N559_4354)


Aliases : N559_4354

Description : isopropylmalate isomerase small subunit [Ensembl]. Aconitase C-terminal domain, swivel domain [InterProScan].


Gene families : OG_02_0000654 (OrthoFinder) Phylogenetic Tree(s): OG0000654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25964
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73182 leuD, b0071 3-isopropylmalate dehydratase small subunit [Ensembl].... 0.09 OrthoFinder
AAL19074 STM0110, leuD 3-isopropylmalate isomerase (dehydratase), subunit with... 0.24 OrthoFinder
AHY40901 leuD, CJ8421_08645 isopropylmalate isomerase small subunit [Ensembl].... 0.02 OrthoFinder
AKI49985 leuD, L2625_02138 3-isopropylmalate dehydratase, small subunit [Ensembl].... 0.09 OrthoFinder
CCL17079 leuD, BN171_1200012 3-isopropylmalate dehydratase small subunit [Ensembl].... 0.05 OrthoFinder
CCP45792 leuD, Rv2987c Probable 3-isopropylmalate dehydratase (small subunit)... 0.03 OrthoFinder
CPD08203 leuD, ERS093114_02013 3-isopropylmalate dehydratase small subunit [Ensembl].... 0.1 OrthoFinder
CRO43194 leuD1 3-isopropylmalate dehydratase small subunit 1 [Ensembl].... 0.05 OrthoFinder
KNA51156 VCV51_031679 3-isopropylmalate dehydratase [Ensembl]. Aconitase... 0.1 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004474 malate synthase activity IEP Enrichment
BP GO:0006011 UDP-glucose metabolic process IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006097 glyoxylate cycle IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008772 [isocitrate dehydrogenase (NADP+)] kinase activity IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046487 glyoxylate metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 3 126
No external refs found!