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  5. AGT25980

AGT25980 (N559_4370)


Aliases : N559_4370

Description : L-arabinose isomerase [Ensembl]. L-arabinose isomerase C-terminal domain, Class II Aldolase and Adducin N-terminal domain [InterProScan].


Gene families : OG_02_0003394 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25980
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73173 araA, b0062 L-arabinose isomerase [Ensembl]. L-arabinose isomerase... 0.1 OrthoFinder
AAL19066 STM0102, araA L-arabinose isomerase [Ensembl]. L-arabinose isomerase... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008733 L-arabinose isomerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR024664 Ara_Isoase_C 363 476
IPR003762 Lara_isomerase 5 359
IPR001303 Aldolase_II/adducin_N 555 743
No external refs found!