AGT26042 (N559_4437, CreB)

Aliases : N559_4437, CreB

Description : DNA-binding response regulator CreB [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT26042
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AAK99332	spr0528, vncR	VncR, response regulator [Ensembl]. Transcriptional...	0.02	OrthoFinder
AAL21670	STM2785, tctD	tricarboxylic transport regulatory protein [Ensembl]....	0.04	OrthoFinder
AKI49374	lisR, L2625_01474	two component response regulator [Ensembl]....	0.03	OrthoFinder
CCG27642	No alias	Two-component response regulator SA14-24 [Ensembl]....	0.02	OrthoFinder
CCL18738	BN171_260007	Two-component response regulator [Ensembl]. Response...	0.04	OrthoFinder
CCL20068	BN171_3690012	Two-component response regulator, CheY family [Ensembl]....	0.04	OrthoFinder
CCL20132	BN171_370006	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CRN89694	tctD	Transcriptional regulatory protein tctD [Ensembl]....	0.04	OrthoFinder
CRO88807	walR_1	Transcriptional regulatory protein WalR [Ensembl]....	0.03	OrthoFinder
CRP07594	czcR_2	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
CRP27775	kdpE	KDP operon transcriptional regulatory protein KdpE...	0.02	OrthoFinder
KNA51549	VCV51_033592	response regulator receiver domain-containing protein...	0.03	OrthoFinder
KNA52268	VCV51_033433	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA56836	VCV51_030475, PhoB	phosphate regulon transcriptional regulatory protein...	0.03	OrthoFinder
KNA58243	VCV51_032751	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA60550	VCV51_032221	response regulator receiver domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Enrichment
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0003864	3-methyl-2-oxobutanoate hydroxymethyltransferase activity	IEP	Enrichment
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Enrichment
MF	GO:0004140	dephospho-CoA kinase activity	IEP	Enrichment
MF	GO:0004857	enzyme inhibitor activity	IEP	Enrichment
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Enrichment
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0015936	coenzyme A metabolic process	IEP	Enrichment
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Enrichment
BP	GO:0015939	pantothenate metabolic process	IEP	Enrichment
BP	GO:0015940	pantothenate biosynthetic process	IEP	Enrichment
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Enrichment
MF	GO:0030234	enzyme regulator activity	IEP	Enrichment
MF	GO:0030414	peptidase inhibitor activity	IEP	Enrichment
MF	GO:0031072	heat shock protein binding	IEP	Enrichment
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Enrichment
MF	GO:0042802	identical protein binding	IEP	Enrichment
MF	GO:0042803	protein homodimerization activity	IEP	Enrichment
MF	GO:0051087	chaperone binding	IEP	Enrichment
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Enrichment
MF	GO:0060590	ATPase regulator activity	IEP	Enrichment
MF	GO:0061134	peptidase regulator activity	IEP	Enrichment
MF	GO:0061135	endopeptidase regulator activity	IEP	Enrichment
MF	GO:0098772	molecular function regulator	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	150	226
IPR001789	Sig_transdc_resp-reg_receiver	6	115

External Links

No external refs found!

AGT26042 (N559_4437, CreB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation