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  5. AGT26286

AGT26286 (N559_4694)


Aliases : N559_4694

Description : iron-sulfur cluster repair di-iron protein [Ensembl].


Gene families : OG_02_0001993 (OrthoFinder) Phylogenetic Tree(s): OG0001993_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26286
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC77166 ytfE, b4209 iron-sulfur cluster repair protein RIC [Ensembl]. Domain... 0.05 OrthoFinder
AAL23219 STM4399, ytfE putative cell morphogenesis [Ensembl]. Domain of Unknown... 0.31 OrthoFinder
CPC93622 scdA, ERS093114_01673 DnrN [Ensembl]. Domain of Unknown function (DUF542),... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006063 uronic acid metabolic process IEP Enrichment
BP GO:0006064 glucuronate catabolic process IEP Enrichment
MF GO:0008880 glucuronate isomerase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0010393 galacturonan metabolic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019585 glucuronate metabolic process IEP Enrichment
BP GO:0045488 pectin metabolic process IEP Enrichment
BP GO:0045490 pectin catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0047487 oligogalacturonide lyase activity IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR012312 Haemerythrin-like 77 216
IPR019903 RIC_family 5 58
No external refs found!