AGT26419 (N559_4833)


Aliases : N559_4833

Description : redox-sensing activator of soxS [Ensembl]. MerR-type HTH domain, MerR family regulatory protein [InterProScan].


Gene families : OG_02_0001693 (OrthoFinder) Phylogenetic Tree(s): OG0001693_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26419
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AAL23090 STM4266, soxR redox-sensing transcriptional activator SoxR [Ensembl].... 0.01 OrthoFinder
CRO70159 soxR_2 Redox-sensitive transcriptional activator SoxR... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0015105 arsenite transmembrane transporter activity IEP Enrichment
BP GO:0015700 arsenite transport IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR015358 Tscrpt_reg_MerR_DNA-bd 55 119
IPR000551 MerR-type_HTH_dom 13 49
No external refs found!