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  5. AGT26481

AGT26481 (N559_4897)


Aliases : N559_4897

Description : sorbose permease IIC component [Ensembl]. mannose/fructose/sorbose family [InterProScan].


Gene families : OG_02_0000588 (OrthoFinder) Phylogenetic Tree(s): OG0000588_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26481
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAK98865 spr0061, PTS-EIIC Phosphotransferase system sugar-specific EIIC component... 0.04 OrthoFinder
AEA94199 OG1RF_11512 PTS family mannose/fructose/sorbose porter component IIC... 0.03 OrthoFinder
AGT23663 N559_1930 PTS enzyme IIC, mannose-specific [Ensembl].... 0.02 OrthoFinder
AKI47999 L2625_00023 PTS system, mannose-specific, IIC component, putative... 0.04 OrthoFinder
AKI48733 L2625_00803 PTS system, mannose specific, IIC component [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR004700 PTS_IIC_man 6 237
No external refs found!