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AGT26482 (N559_4898)


Aliases : N559_4898

Description : PTS enzyme IID, mannose-specific [Ensembl]. PTS system mannose/fructose/sorbose family IID component [InterProScan].


Gene families : OG_02_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26482
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAK99099 spr0295, PTS-EII Phosphotransferase system sugar-specific EII component... 0.04 OrthoFinder
AAL00769 spr1967, PTS-EII Phosphotransferase system sugar-specific EII component... 0.04 OrthoFinder
AAL23356 STM4538 putative PTS permease [Ensembl]. PTS system... 0.04 OrthoFinder
AEA92708 OG1RF_10021 PTS family mannose/fructose/sorbose porter component IID... 0.03 OrthoFinder
AEA94300 OG1RF_11613 PTS family mannose/fructose/sorbose porter component IID... 0.04 OrthoFinder
AKI48071 manN, L2625_00097 PTS system, mannose/fructose/sorbose family, IID... 0.03 OrthoFinder
AKI49995 L2625_02148 PTS system, mannose/fructose/sorbose family, IID... 0.03 OrthoFinder
CCG27555 No alias PTS system, N-acetylgalactosamine-specific IID component... 0.03 OrthoFinder
CCL17253 BN171_1410015 PTS system, mannose/fructose/sorbose IID component... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR004704 PTS_IID_man 9 277
No external refs found!