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  5. AGT26512

AGT26512 (N559_4928)


Aliases : N559_4928

Description : hypothetical protein [Ensembl]. GGDEF domain, Cache domain [InterProScan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26512
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC74110 dgcT, b1025 diguanylate cyclase, membrane-anchored [Ensembl].... 0.04 OrthoFinder
AAC74423 dgcM, b1341 diguanylate cyclase, csgD regulator [Ensembl]. PAS fold,... 0.04 OrthoFinder
AGT24792 N559_3131 putative sensor kinase [Ensembl]. GGDEF domain, HAMP... 0.04 OrthoFinder
CCL17159 BN171_1330020 Two-component sensor histidine kinase [Ensembl].... 0.05 OrthoFinder
CCL17605 BN171_1610001 Putative diguanylate kinase signaling protein [Ensembl].... 0.05 OrthoFinder
CCL17606 BN171_1610002 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL19223 BN171_2970002 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL19382 BN171_3090001 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CCL20486 BN171_550008 Putative diguanylate kinase signaling protein (fragment)... 0.03 OrthoFinder
CCL20487 BN171_560001 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CRN70164 gmr_2 Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. PAS fold,... 0.05 OrthoFinder
CRO51132 pleD_1 Stalked cell differentiation-controlling protein... 0.04 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.01 OrthoFinder
CRP73142 pleD_6 Stalked cell differentiation-controlling protein... 0.03 OrthoFinder
KNA51667 VCV51_031494 GGDEF domain-containing protein [Ensembl]. Cache domain,... 0.04 OrthoFinder
KNA53037 VCV51_031592 GGDEF domain-containing protein [Ensembl]. PAS fold, PAS... 0.04 OrthoFinder
KNA54690 VCV51_030775 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.04 OrthoFinder
KNA55694 VCV51_031005 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.05 OrthoFinder
KNA55698 VCV51_031009 CHASE domain-containing protein [Ensembl]. CHASE domain,... 0.04 OrthoFinder
KNA56144 VCV51_032984 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA59739 VCV51_032434 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA59943 VCV51_032355 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.04 OrthoFinder
KNA59959 VCV51_032371 GGDEF domain-containing protein [Ensembl]. PAS fold,... 0.04 OrthoFinder
KNA60732 VCV51_032172 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.04 OrthoFinder
KNA61013 VCV51_031988 GGDEF domain-containing protein [Ensembl]. PAS domain,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
BP GO:0008616 queuosine biosynthetic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
MF GO:0033739 preQ1 synthase activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
BP GO:0046116 queuosine metabolic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 331 481
IPR033479 dCache_1 47 246
No external refs found!