AGT26627 (N559_5050, CytR)


Aliases : N559_5050, CytR

Description : DNA-binding transcriptional regulator CytR [Ensembl]. Periplasmic binding protein-like domain, LacI-type HTH domain, lacI family [InterProScan].


Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26627
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAL21246 STM2345 putative transcriptional regulator [Ensembl]. Bacterial... 0.03 OrthoFinder
AAL21887 STM3011, galR transcriptional repressor of galETK operon [Ensembl].... 0.04 OrthoFinder
AAL22744 STM3886, rbsR transcriptional repressor for rbs operon (GalR/LacI... 0.04 OrthoFinder
AAL22934 STM4094, cytR GalR/LacI family transcriptional repressor [Ensembl].... 0.06 OrthoFinder
CCG26537 MalR Maltose operon transcriptional repressor MalR,LacI... 0.04 OrthoFinder
EDJ91486 CGSHi22421_06942 hypothetical protein [Ensembl]. Bacterial regulatory... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005539 glycosaminoglycan binding IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
MF GO:0042834 peptidoglycan binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
InterPro domains Description Start Stop
IPR000843 HTH_LacI 1 45
No external refs found!