Aliases : N559_5050, CytR
Description : DNA-binding transcriptional regulator CytR [Ensembl]. Periplasmic binding protein-like domain, LacI-type HTH domain, lacI family [InterProScan].
Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AGT26627 | |
Cluster | HCCA: Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL21246 | STM2345 | putative transcriptional regulator [Ensembl]. Bacterial... | 0.03 | OrthoFinder | |
AAL21887 | STM3011, galR | transcriptional repressor of galETK operon [Ensembl].... | 0.04 | OrthoFinder | |
AAL22744 | STM3886, rbsR | transcriptional repressor for rbs operon (GalR/LacI... | 0.04 | OrthoFinder | |
AAL22934 | STM4094, cytR | GalR/LacI family transcriptional repressor [Ensembl].... | 0.06 | OrthoFinder | |
CCG26537 | MalR | Maltose operon transcriptional repressor MalR,LacI... | 0.04 | OrthoFinder | |
EDJ91486 | CGSHi22421_06942 | hypothetical protein [Ensembl]. Bacterial regulatory... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Enrichment |
BP | GO:0000902 | cell morphogenesis | IEP | Enrichment |
MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | Enrichment |
MF | GO:0004807 | triose-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0005539 | glycosaminoglycan binding | IEP | Enrichment |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Enrichment |
BP | GO:0009653 | anatomical structure morphogenesis | IEP | Enrichment |
MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
MF | GO:0016853 | isomerase activity | IEP | Enrichment |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
BP | GO:0018208 | peptidyl-proline modification | IEP | Enrichment |
BP | GO:0032502 | developmental process | IEP | Enrichment |
MF | GO:0042834 | peptidoglycan binding | IEP | Enrichment |
BP | GO:0051259 | protein complex oligomerization | IEP | Enrichment |
BP | GO:0051302 | regulation of cell division | IEP | Enrichment |
BP | GO:0070206 | protein trimerization | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000843 | HTH_LacI | 1 | 45 |
No external refs found! |