AGT26699 (N559_5125)

Aliases : N559_5125

Description : D-ribose pyranase [Ensembl]. FucU transport protein family [InterProScan].

Gene families : OG_02_0001866 (OrthoFinder) Phylogenetic Tree(s): OG0001866_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT26699
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AAC76771	rbsD, b3748	D-ribose pyranase [Ensembl]. RbsD / FucU transport...	0.15	OrthoFinder
AAL22739	STM3881, rbsD	D-ribose high-affinity transport system [Ensembl]. RbsD...	0.1	OrthoFinder
CPC93182	rbsD, ERS093114_01663	Ribose ABC transport system%2C high affinity permease...	0.03	OrthoFinder
KNA60664	VCV51_032103	RbsD/FucU transporter [Ensembl]. RbsD / FucU transport...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016853	isomerase activity	IEA	Interproscan
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0048029	monosaccharide binding	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Enrichment
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Enrichment
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007721	RbsD_FucU	1	138

External Links

No external refs found!