AKI48007 (L2625_00032)

Aliases : L2625_00032

Description : transcriptional regulator, LacI family [Ensembl]. LacI-type HTH domain [Interproscan].

Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI48007
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AAL21095	STM2191, galS	GalR/LacI family transcriptional repressor of mgl operon...	0.02	OrthoFinder
AAL21246	STM2345	putative transcriptional regulator [Ensembl]. Bacterial...	0.03	OrthoFinder
AAL21887	STM3011, galR	transcriptional repressor of galETK operon [Ensembl]....	0.03	OrthoFinder
AAL22744	STM3886, rbsR	transcriptional repressor for rbs operon (GalR/LacI...	0.04	OrthoFinder
AAL22934	STM4094, cytR	GalR/LacI family transcriptional repressor [Ensembl]....	0.02	OrthoFinder
AGT22061	N559_0239	putative transcriptional regulator [Ensembl]....	0.04	OrthoFinder
AGT22772	N559_0986	putative transcriptional regulator [Ensembl]....	0.03	OrthoFinder
AGT22777	N559_0991, GalR	DNA-binding transcriptional regulator GalR [Ensembl]....	0.03	OrthoFinder
AGT22953	N559_1185	ascBF operon repressor [Ensembl]. Periplasmic binding...	0.05	OrthoFinder
AGT24235	N559_2553	putative periplasmic binding protein/LacI...	0.05	OrthoFinder
AGT24386	N559_2710	lac repressor [Ensembl]. Periplasmic binding...	0.03	OrthoFinder
AGT25335	N559_3695	putative periplasmic binding protein/LacI...	0.04	OrthoFinder
AGT26654	N559_5077	repressor of galETK operon [Ensembl]. Periplasmic...	0.04	OrthoFinder
CCG26537	MalR	Maltose operon transcriptional repressor MalR,LacI...	0.03	OrthoFinder
CCL16946	BN171_1020013	Transcriptional regulator, LacI family [Ensembl]....	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0001216	DNA-binding transcription activator activity	IEP	Enrichment
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0003951	NAD+ kinase activity	IEP	Enrichment
BP	GO:0006099	tricarboxylic acid cycle	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0006741	NADP biosynthetic process	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0019842	vitamin binding	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Enrichment
MF	GO:0032977	membrane insertase activity	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment
MF	GO:0140104	molecular carrier activity	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment
MF	GO:0140597	protein carrier activity	IEP	Enrichment
MF	GO:1901681	sulfur compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000843	HTH_LacI	5	50

External Links

No external refs found!