AKI48362 (L2625_00417)

Aliases : L2625_00417

Description : transcriptional antiterminator [Ensembl]. PTS EIIA type-2 domain, PRD domain, Helix-turn-helix, Mga helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKI48362
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAK99083 spr0279, bglG Transcription antiterminator BglG family [Ensembl]. HTH... 0.05 OrthoFinder
AEA93246 OG1RF_10559 BglG family transcriptional antiterminator [Ensembl].... 0.03 OrthoFinder
AEA93919 OG1RF_11232 DNA-binding/PRD domain protein [Ensembl]. HTH domain,... 0.04 OrthoFinder
AEA95241 srlM, OG1RF_12554 putative transcriptional activator SrlM [Ensembl]. HTH... 0.05 OrthoFinder
AKI50136 L2625_02299 transcriptional antiterminator, putative [Ensembl].... 0.06 OrthoFinder
CCG26679 No alias Transcriptional antiterminator of lichenan operon, BglG... 0.03 OrthoFinder
CCL18911 BN171_2720011 Transcription antiterminator, PTS operon regulator... 0.03 OrthoFinder
CCL19451 BN171_3150014 Transcription antiterminator, PTS operon regulator... 0.04 OrthoFinder
CCL19579 BN171_3270017 Transcription antiterminator, PTS operon regulator... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR002178 PTS_EIIA_type-2_dom 503 635
IPR011608 PRD 306 394
IPR011608 PRD 206 284
IPR013196 HTH_11 8 66
IPR007737 Mga_HTH 97 168
No external refs found!