AKI48362 (L2625_00417)

Aliases : L2625_00417

Description : transcriptional antiterminator [Ensembl]. PTS EIIA type-2 domain, PRD domain, Helix-turn-helix, Mga helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI48362
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAK99083	spr0279, bglG	Transcription antiterminator BglG family [Ensembl]. HTH...	0.05	OrthoFinder
AEA93246	OG1RF_10559	BglG family transcriptional antiterminator [Ensembl]....	0.03	OrthoFinder
AEA93919	OG1RF_11232	DNA-binding/PRD domain protein [Ensembl]. HTH domain,...	0.04	OrthoFinder
AEA95241	srlM, OG1RF_12554	putative transcriptional activator SrlM [Ensembl]. HTH...	0.05	OrthoFinder
AKI50136	L2625_02299	transcriptional antiterminator, putative [Ensembl]....	0.06	OrthoFinder
CCG26679	No alias	Transcriptional antiterminator of lichenan operon, BglG...	0.03	OrthoFinder
CCL18911	BN171_2720011	Transcription antiterminator, PTS operon regulator...	0.03	OrthoFinder
CCL19451	BN171_3150014	Transcription antiterminator, PTS operon regulator...	0.04	OrthoFinder
CCL19579	BN171_3270017	Transcription antiterminator, PTS operon regulator...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0004559	alpha-mannosidase activity	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0005996	monosaccharide metabolic process	IEP	Enrichment
BP	GO:0006013	mannose metabolic process	IEP	Enrichment
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Enrichment
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
MF	GO:0008733	L-arabinose isomerase activity	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
MF	GO:0015923	mannosidase activity	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016854	racemase and epimerase activity	IEP	Enrichment
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Enrichment
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Enrichment
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Enrichment
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Enrichment
BP	GO:0019318	hexose metabolic process	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002178	PTS_EIIA_type-2_dom	503	635
IPR011608	PRD	306	394
IPR011608	PRD	206	284
IPR013196	HTH_11	8	66
IPR007737	Mga_HTH	97	168

External Links

No external refs found!

AKI48362 (L2625_00417)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation