AKI48437 (L2625_00496)

Aliases : L2625_00496

Description : transcriptional regulator, LysR family [Ensembl]. Transcription regulator HTH, LysR [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKI48437
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC75590 hcaR, b2537 hca operon transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AAC75958 ygfI, b2921 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AAL20406 STM1487, ynfL putative LysR family transcriptional regulator... 0.03 OrthoFinder
AAL22693 STM3834 putative LysR family transcriptional regulator... 0.02 OrthoFinder
AEA93063 OG1RF_10376 LysR family transcriptional regulator [Ensembl]. LysR... 0.04 OrthoFinder
AGT25969 N559_4359 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
AGT26618 N559_5041 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
CCL19137 BN171_2880004 Transcriptional regulator, LysR family [Ensembl]. LysR... 0.03 OrthoFinder
CPC44234 lysR, ERS093114_00453 LysR family regulatory protein [Ensembl]. LysR substrate... 0.03 OrthoFinder
CPC63513 cidR, ERS093114_00910 LysR family regulatory protein CidR [Ensembl]. LysR... 0.04 OrthoFinder
CPD33378 gltC, ERS093114_02589 Transcription activator of glutamate synthase operon... 0.04 OrthoFinder
CRO80200 cynR_3 Cyn operon transcriptional activator [Ensembl]. LysR... 0.02 OrthoFinder
CRP05348 cmpR_4 HTH-type transcriptional activator CmpR [Ensembl]. LysR... 0.02 OrthoFinder
CRP45508 benM_8 Ben and cat operon transcriptional regulator [Ensembl].... 0.02 OrthoFinder
KNA56848 VCV51_032860 LysR substrate binding domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 3 62
IPR005119 LysR_subst-bd 89 290
No external refs found!