AKI48437 (L2625_00496)

Aliases : L2625_00496

Description : transcriptional regulator, LysR family [Ensembl]. Transcription regulator HTH, LysR [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI48437
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAC75590	hcaR, b2537	hca operon transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
AAC75958	ygfI, b2921	putative DNA-binding transcriptional regulator...	0.03	OrthoFinder
AAL20406	STM1487, ynfL	putative LysR family transcriptional regulator...	0.03	OrthoFinder
AAL22693	STM3834	putative LysR family transcriptional regulator...	0.02	OrthoFinder
AEA93063	OG1RF_10376	LysR family transcriptional regulator [Ensembl]. LysR...	0.04	OrthoFinder
AGT25969	N559_4359	putative LysR-family transcriptional regulator...	0.03	OrthoFinder
AGT26618	N559_5041	putative LysR-family transcriptional regulator...	0.03	OrthoFinder
CCL19137	BN171_2880004	Transcriptional regulator, LysR family [Ensembl]. LysR...	0.03	OrthoFinder
CPC44234	lysR, ERS093114_00453	LysR family regulatory protein [Ensembl]. LysR substrate...	0.03	OrthoFinder
CPC63513	cidR, ERS093114_00910	LysR family regulatory protein CidR [Ensembl]. LysR...	0.04	OrthoFinder
CPD33378	gltC, ERS093114_02589	Transcription activator of glutamate synthase operon...	0.04	OrthoFinder
CRO80200	cynR_3	Cyn operon transcriptional activator [Ensembl]. LysR...	0.02	OrthoFinder
CRP05348	cmpR_4	HTH-type transcriptional activator CmpR [Ensembl]. LysR...	0.02	OrthoFinder
CRP45508	benM_8	Ben and cat operon transcriptional regulator [Ensembl]....	0.02	OrthoFinder
KNA56848	VCV51_032860	LysR substrate binding domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000847	Tscrpt_reg_HTH_LysR	3	62
IPR005119	LysR_subst-bd	89	290

External Links

No external refs found!