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  5. CCL17484

CCL17484 (truB, BN171_1520002)


Aliases : truB, BN171_1520002

Description : tRNA pseudouridine synthase B [Ensembl]. TruB family pseudouridylate synthase (N terminal domain), tRNA pseudouridylate synthase B C-terminal domain [Interproscan].


Gene families : OG_02_0000639 (OrthoFinder) Phylogenetic Tree(s): OG0000639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17484
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC76200 truB, b3166 tRNA pseudouridine synthase B: tRNA pseudouridine(55)... 0.04 OrthoFinder
AAL22156 STM3284, truB tRNA pseudouridine 5S synthase [Ensembl]. Pseudouridine... 0.03 OrthoFinder
AHY40308 truB, CJ8421_05480 tRNA pseudouridine synthase B [Ensembl]. TruB family... 0.04 OrthoFinder
AKI49324 truB, L2625_01418 tRNA pseudouridine synthase B [Ensembl]. tRNA... 0.03 OrthoFinder
AKP14148 truB, WX61_00059 tRNA pseudouridine synthase B [Ensembl]. Pseudouridine... 0.03 OrthoFinder
CRO21120 truB tRNA pseudouridine synthase B [Ensembl]. Pseudouridine... 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR032819 TruB_C 174 232
IPR002501 PsdUridine_synth_N 23 173
UniProtKB U3WX01