CCL17522 (cspB, BN171_1540001)


Aliases : cspB, BN171_1540001

Description : Cold shock protein CspB [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].


Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17522
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AGT22053 N559_0231 major cold shock protein [Ensembl]. 'Cold-shock'... 0.02 OrthoFinder
CPC31752 cspA, ERS093114_00015 CSD family cold shock protein [Ensembl]. 'Cold-shock'... 0.04 OrthoFinder
CRP63148 cspA_4 Major cold shock protein CspA [Ensembl]. 'Cold-shock'... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0005275 amine transmembrane transporter activity IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
MF GO:0015101 organic cation transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0015665 alcohol transmembrane transporter activity IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0034228 ethanolamine transmembrane transporter activity IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 3 65
UniProtKB U3WU04