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Aliases : cspB, BN171_1540001
Description : Cold shock protein CspB [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].
Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCL17522 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AGT22053 | N559_0231 | major cold shock protein [Ensembl]. 'Cold-shock'... | 0.02 | OrthoFinder | |
| CPC31752 | cspA, ERS093114_00015 | CSD family cold shock protein [Ensembl]. 'Cold-shock'... | 0.04 | OrthoFinder | |
| CRP63148 | cspA_4 | Major cold shock protein CspA [Ensembl]. 'Cold-shock'... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | Enrichment |
| MF | GO:0005275 | amine transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0006382 | adenosine to inosine editing | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| MF | GO:0008320 | protein transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015101 | organic cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015450 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015665 | alcohol transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0016553 | base conversion or substitution editing | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0034228 | ethanolamine transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Enrichment |
| MF | GO:0140318 | protein transporter activity | IEP | Enrichment |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002059 | CSP_DNA-bd | 3 | 65 |
| UniProtKB | U3WU04 |