AKI50558 (rpsQ, L2625_02768)

Aliases : rpsQ, L2625_02768

Description : ribosomal protein S17 [Ensembl]. Ribosomal protein S17/S11 [Interproscan].

Gene families : OG_02_0000567 (OrthoFinder) Phylogenetic Tree(s): OG0000567_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI50558
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AAC76336	rpsQ, b3311	30S ribosomal subunit protein S17 [Ensembl]. Ribosomal...	0.22	OrthoFinder
AAK99002	spr0198, rpsQ	30S Ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.24	OrthoFinder
AAL22294	STM3431, rpsQ	30S ribosomal subunit protein S17 [Ensembl]. Ribosomal...	0.26	OrthoFinder
ADK87159	rpsQ, MPNE_0203	30S ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.16	OrthoFinder
AEA92847	rpsQ, OG1RF_10160	30S ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.22	OrthoFinder
AHY40883	rpsQ, CJ8421_08555	30S ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.14	OrthoFinder
AKP15132	rpsQ, WX61_01078	30S ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.1	OrthoFinder
CBI65726	rpsQ, HPB8_169	small subunit ribosomal protein S17 [Ensembl]. Ribosomal...	0.07	OrthoFinder
CCG27388	No alias	SSU ribosomal protein S17p (S11e) [Ensembl]. Ribosomal...	0.25	OrthoFinder
CCL20572	rpsQ, BN171_70012	30S ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.2	OrthoFinder
CCP43454	rpsQ, Rv0710	30S ribosomal protein S17 RpsQ [Ensembl]. Ribosomal...	0.11	OrthoFinder
CRO74018	rpsQ	30S ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.16	OrthoFinder
EDJ91363	CGSHi22421_04648	30S ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.2	OrthoFinder
KNA54981	VCV51_033164	30S ribosomal protein S17 [Ensembl]. Ribosomal protein...	0.22	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0015833	peptide transport	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
MF	GO:0016779	nucleotidyltransferase activity	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0032774	RNA biosynthetic process	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0042886	amide transport	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000266	Ribosomal_S17/S11	12	79

External Links

No external refs found!

AKI50558 (rpsQ, L2625_02768)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation