Coexpression cluster: Cluster_2 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005840 ribosome 19.01% (23/121) 3.67 0.0 0.0
GO:0043229 intracellular organelle 19.01% (23/121) 3.57 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 19.01% (23/121) 3.57 0.0 0.0
GO:0003735 structural constituent of ribosome 19.01% (23/121) 3.57 0.0 0.0
GO:0006412 translation 19.01% (23/121) 3.61 0.0 0.0
GO:0043043 peptide biosynthetic process 19.01% (23/121) 3.54 0.0 0.0
GO:0006518 peptide metabolic process 19.01% (23/121) 3.54 0.0 0.0
GO:0043226 organelle 19.01% (23/121) 3.51 0.0 0.0
GO:0043228 non-membrane-bounded organelle 19.01% (23/121) 3.51 0.0 0.0
GO:0043603 cellular amide metabolic process 19.01% (23/121) 3.48 0.0 0.0
GO:0043604 amide biosynthetic process 19.01% (23/121) 3.48 0.0 0.0
GO:0005198 structural molecule activity 19.01% (23/121) 3.45 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 20.66% (25/121) 3.18 0.0 0.0
GO:0044267 cellular protein metabolic process 19.01% (23/121) 3.36 0.0 0.0
GO:0019538 protein metabolic process 22.31% (27/121) 2.94 0.0 0.0
GO:0009059 macromolecule biosynthetic process 20.66% (25/121) 3.04 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 20.66% (25/121) 2.42 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 20.66% (25/121) 2.3 0.0 0.0
GO:0043170 macromolecule metabolic process 26.45% (32/121) 1.88 0.0 0.0
GO:0044249 cellular biosynthetic process 23.97% (29/121) 1.92 0.0 0.0
GO:1901576 organic substance biosynthetic process 23.97% (29/121) 1.89 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 19.83% (24/121) 2.11 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 26.45% (32/121) 1.68 0.0 0.0
GO:0009058 biosynthetic process 24.79% (30/121) 1.75 0.0 0.0
GO:0005575 cellular_component 32.23% (39/121) 1.31 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 24.79% (30/121) 1.57 0.0 0.0
GO:0110165 cellular anatomical entity 30.58% (37/121) 1.32 0.0 0.0
GO:0006807 nitrogen compound metabolic process 28.1% (34/121) 1.28 0.0 3e-06
GO:0044238 primary metabolic process 30.58% (37/121) 1.16 1e-06 7e-06
GO:0044237 cellular metabolic process 28.93% (35/121) 1.2 1e-06 7e-06
GO:0009987 cellular process 37.19% (45/121) 0.88 8e-06 7.2e-05
GO:0071704 organic substance metabolic process 31.4% (38/121) 0.92 2.9e-05 0.000254
GO:0008152 metabolic process 33.06% (40/121) 0.84 6.4e-05 0.000535
GO:0006568 tryptophan metabolic process 1.65% (2/121) 4.54 0.00183 0.014084
GO:0042430 indole-containing compound metabolic process 1.65% (2/121) 4.54 0.00183 0.014084
GO:0006586 indolalkylamine metabolic process 1.65% (2/121) 4.54 0.00183 0.014084
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_7 0.027 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.126 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.121 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_7 0.079 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.036 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.057 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.152 OrthoFinder Compare
Escherichia coli HCCA Cluster_24 0.03 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_10 0.05 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_17 0.148 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.135 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.092 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.045 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_38 0.036 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_63 0.033 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_2 0.028 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.11 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.087 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.036 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.075 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.03 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.089 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.051 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.192 OrthoFinder Compare
Salmonella enterica HCCA Cluster_31 0.027 OrthoFinder Compare
Salmonella enterica HCCA Cluster_44 0.03 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_5 0.031 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_17 0.038 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_19 0.032 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.193 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_4 0.028 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.124 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.082 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_17 0.043 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.094 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_7 0.035 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_11 0.049 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.188 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_24 0.034 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_30 0.038 OrthoFinder Compare
Sequences (121) (download table)

InterPro Domains

GO Terms

Family Terms