Aliases : L2625_02851
Description : Nucleoid-associated protein [Ensembl]. Nucleoid-associated protein YbaB/EbfC family [Interproscan].
Gene families : OG_02_0000392 (OrthoFinder) Phylogenetic Tree(s): OG0000392_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AKI50640 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC73573 | ybaB, b0471 | DNA-binding protein, putative nucleoid-associated... | 0.03 | OrthoFinder | |
CCG26349 | No alias | Transcriptional regulatory protein [Ensembl]. YbaB/EbfC... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | Enrichment |
MF | GO:0004000 | adenosine deaminase activity | IEP | Enrichment |
MF | GO:0004096 | catalase activity | IEP | Enrichment |
MF | GO:0004146 | dihydrofolate reductase activity | IEP | Enrichment |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Enrichment |
MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Enrichment |
MF | GO:0004536 | deoxyribonuclease activity | IEP | Enrichment |
BP | GO:0006308 | DNA catabolic process | IEP | Enrichment |
BP | GO:0006382 | adenosine to inosine editing | IEP | Enrichment |
MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | Enrichment |
MF | GO:0008855 | exodeoxyribonuclease VII activity | IEP | Enrichment |
CC | GO:0009318 | exodeoxyribonuclease VII complex | IEP | Enrichment |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0016553 | base conversion or substitution editing | IEP | Enrichment |
MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
MF | GO:0019239 | deaminase activity | IEP | Enrichment |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Enrichment |
BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004401 | YbaB/EbfC | 11 | 101 |
No external refs found! |