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  5. CCL17793

CCL17793 (BN171_1800016)


Aliases : BN171_1800016

Description : ABC-type transport system, sugar-family extracellular solute-binding protein [Ensembl]. Periplasmic binding protein domain [Interproscan].


Gene families : OG_02_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17793
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC76774 rbsB, b3751 D-ribose ABC transporter periplasmic binding protein;... 0.03 OrthoFinder
AAC77049 alsB, b4088 D-allose ABC transporter periplasmic binding protein... 0.02 OrthoFinder
AAL22742 STM3884, rbsB D-ribose transport protein [Ensembl]. Periplasmic... 0.03 OrthoFinder
AGT24254 N559_2574 putative ABC transporter, nucleotide binding/ATPase... 0.03 OrthoFinder
AGT26397 N559_4807 D-ribose periplasmic binding protein [Ensembl].... 0.03 OrthoFinder
AGT26696 N559_5122, RbsB D-ribose transporter subunit RbsB [Ensembl]. Periplasmic... 0.04 OrthoFinder
CRN86559 rbsB D-ribose-binding periplasmic protein precursor... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001216 DNA-binding transcription activator activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0009267 cellular response to starvation IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031667 response to nutrient levels IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0031669 cellular response to nutrient levels IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042594 response to starvation IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR025997 SBP_2_dom 39 296
UniProtKB U3WU86