AKP15123 (rplC, WX61_01069)

Aliases : rplC, WX61_01069

Description : 50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3 [Interproscan].

Gene families : OG_02_0000401 (OrthoFinder) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKP15123
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AAC76345	rplC, b3320	50S ribosomal subunit protein L3 [Ensembl]. Ribosomal...	0.1	OrthoFinder
AAK98992	spr0188, rplC	50S Ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.06	OrthoFinder
AAL22303	STM3440, rplC	50S ribosomal subunit protein L3 [Ensembl]. Ribosomal...	0.08	OrthoFinder
ADK86699	rplC, MPNE_0194	50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.04	OrthoFinder
AEA92838	rplC, OG1RF_10151	50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.06	OrthoFinder
AGT22244	N559_0434	50S ribosomal protein L3 [Ensembl].	0.08	OrthoFinder
AHY40892	rplC, CJ8421_08600	50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.08	OrthoFinder
AKI50567	rplC, L2625_02777	ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.05	OrthoFinder
CBI65717	rplC, HPB8_160	large subunit ribosomal protein L3 [Ensembl]. Ribosomal...	0.07	OrthoFinder
CCG27379	No alias	LSU ribosomal protein L3p (L3e) [Ensembl]. Ribosomal...	0.03	OrthoFinder
CCL20563	rplC, BN171_70003	50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.07	OrthoFinder
CCP43445	rplC, Rv0701	50S ribosomal protein L3 RplC [Ensembl]. Ribosomal...	0.05	OrthoFinder
CPD13496	rplC, ERS093114_02122	50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.09	OrthoFinder
CRO73740	rplC	50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.08	OrthoFinder
EDJ91354	CGSHi22421_04603	acetyl-CoA:acetoacetyl-CoA transferase subunit alpha...	0.06	OrthoFinder
KNA54972	VCV51_033155	50S ribosomal protein L3 [Ensembl]. Ribosomal protein L3...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004521	endoribonuclease activity	IEP	Enrichment
MF	GO:0004525	ribonuclease III activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006812	cation transport	IEP	Enrichment
MF	GO:0008882	[glutamate-ammonia-ligase] adenylyltransferase activity	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016779	nucleotidyltransferase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0034220	ion transmembrane transport	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
BP	GO:0045454	cell redox homeostasis	IEP	Enrichment
BP	GO:0046034	ATP metabolic process	IEP	Enrichment
MF	GO:0070566	adenylyltransferase activity	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment
BP	GO:1902600	proton transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000597	Ribosomal_L3	55	185

External Links

No external refs found!

AKP15123 (rplC, WX61_01069)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation