AKP15786 (cspD, WX61_01751)

Aliases : cspD, WX61_01751

Description : Cold shock-like protein CspD [Ensembl]. 'Cold-shock' DNA-binding domain [Interproscan].

Gene families : OG_02_0000056 (OrthoFinder) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKP15786
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAL20752 STM1837, cspC cold shock protein [Ensembl]. 'Cold-shock' DNA-binding... 0.03 OrthoFinder
AEA93842 cspA, OG1RF_11155 cold shock protein CspA [Ensembl]. 'Cold-shock'... 0.04 OrthoFinder
AGT22053 N559_0231 major cold shock protein [Ensembl]. 'Cold-shock'... 0.04 OrthoFinder
CCL17057 cspA, BN171_1130011 Cold shock protein [Ensembl]. 'Cold-shock' DNA-binding... 0.03 OrthoFinder
CCP46471 cspA, Rv3648c Probable cold shock protein A CspA [Ensembl].... 0.02 OrthoFinder
CRO87434 cspA_2 Major cold shock protein CspA [Ensembl]. 'Cold-shock'... 0.03 OrthoFinder
KNA53869 VCV51_033237, CspD cold shock domain-containing protein CspD [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006808 regulation of nitrogen utilization IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 3 66
No external refs found!