CCL18309 (BN171_2210009)

Aliases : BN171_2210009

Description : Transcriptional regulator, AraC family [Ensembl]. Sensory domain found in PocR, Helix-turn-helix domain, Cupin domain [Interproscan].

Gene families : OG_02_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCL18309
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AEA94354	OG1RF_11667	AraC family transcriptional regulator [Ensembl]....	0.04	OrthoFinder
AEA94765	OG1RF_12078	AraC family transcriptional regulator [Ensembl]....	0.04	OrthoFinder
CCL19921	BN171_360015	Transcriptional regulator, AraC family [Ensembl]....	0.05	OrthoFinder
KNA60578	VCV51_032249	AraC family Bacterial regulatory helix-turn-helix...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003896	DNA primase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
MF	GO:0016853	isomerase activity	IEP	Enrichment
MF	GO:0016866	intramolecular transferase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR018771	PocR_dom	128	282
IPR013096	Cupin_2	38	104
IPR018060	HTH_AraC	468	544

External Links

UniProtKB	U3WZD7

CCL18309 (BN171_2210009)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation