CCL18309 (BN171_2210009)

Aliases : BN171_2210009

Description : Transcriptional regulator, AraC family [Ensembl]. Sensory domain found in PocR, Helix-turn-helix domain, Cupin domain [Interproscan].

Gene families : OG_02_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL18309
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AEA94354 OG1RF_11667 AraC family transcriptional regulator [Ensembl].... 0.04 OrthoFinder
AEA94765 OG1RF_12078 AraC family transcriptional regulator [Ensembl].... 0.04 OrthoFinder
CCL19921 BN171_360015 Transcriptional regulator, AraC family [Ensembl].... 0.05 OrthoFinder
KNA60578 VCV51_032249 AraC family Bacterial regulatory helix-turn-helix... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR018771 PocR_dom 128 282
IPR013096 Cupin_2 38 104
IPR018060 HTH_AraC 468 544
UniProtKB U3WZD7