- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : STM0210, cdaR
Description : putative inner membrane protein [Ensembl]. GGDEF-like domain, Putative sugar diacid recognition, PucR C-terminal helix-turn-helix domain [Interproscan].
Gene families : OG_02_0000759 (OrthoFinder) Phylogenetic Tree(s): OG0000759_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL19174 | |
| Cluster | HCCA: Cluster_38 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73273 | cdaR, b0162 | carbohydrate diacid regulon transcriptional regulator;... | 0.11 | OrthoFinder | |
| AEA94434 | OG1RF_11747 | fis family DNA-binding protein [Ensembl]. PucR... | 0.04 | OrthoFinder | |
| AGT24292 | N559_2616 | putative sugar diacid utilization regulator [Ensembl].... | 0.04 | OrthoFinder | |
| AGT25859 | N559_4237, CdaR | carbohydrate diacid transcriptional activator CdaR... | 0.12 | OrthoFinder | |
| CRP81034 | cdaR | Sugar diacid regulator [Ensembl]. GGDEF-like domain,... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Enrichment |
| BP | GO:0006050 | mannosamine metabolic process | IEP | Enrichment |
| BP | GO:0006051 | N-acetylmannosamine metabolic process | IEP | Enrichment |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Enrichment |
| MF | GO:0008887 | glycerate kinase activity | IEP | Enrichment |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015556 | C4-dicarboxylate transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| BP | GO:0016310 | phosphorylation | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0031388 | organic acid phosphorylation | IEP | Enrichment |
| BP | GO:0034219 | carbohydrate transmembrane transport | IEP | Enrichment |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Enrichment |
| MF | GO:0047465 | N-acylglucosamine-6-phosphate 2-epimerase activity | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| No external refs found! |