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AAL19499 (STM0545, fimC)


Aliases : STM0545, fimC

Description : periplasmic chaperone, required for type 1 fimbriae [Ensembl]. Pili assembly chaperone PapD, Pili and flagellar-assembly chaperone [Interproscan].


Gene families : OG_02_0001004 (OrthoFinder) Phylogenetic Tree(s): OG0001004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19499
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC73633 sfmC, b0531 putative periplasmic pilus chaperone [Ensembl]. Pili... 0.04 OrthoFinder
AAC74025 elfD, b0939 putative periplasmic pilin chaperone [Ensembl]. Pili... 0.05 OrthoFinder
AAL19140 STM0176, stiB putative fimbrial chaparone [Ensembl]. Pili assembly... 0.04 OrthoFinder
AAL22499 STM3639, lpfB long polar fimbrial chaperone [Ensembl]. Pili assembly... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0030288 outer membrane-bounded periplasmic space IEA Interproscan
BP GO:0071555 cell wall organization IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0034618 arginine binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR016148 Pili_assmbl_chaperone_C 167 222
IPR016147 Pili_assmbl_chaperone_N 26 145
No external refs found!