Coexpression cluster: Cluster_6 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016491 oxidoreductase activity 19.7% (40/203) 2.11 0.0 0.0
GO:0055114 obsolete oxidation-reduction process 15.76% (32/203) 1.92 0.0 0.0
GO:1902600 proton transmembrane transport 3.45% (7/203) 4.13 0.0 2e-06
GO:0009055 electron transfer activity 5.42% (11/203) 3.09 0.0 2e-06
GO:0003824 catalytic activity 39.9% (81/203) 0.81 0.0 2e-06
GO:0009142 nucleoside triphosphate biosynthetic process 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0015985 energy coupled proton transport, down electrochemical gradient 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0006754 ATP biosynthetic process 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0015986 ATP synthesis coupled proton transport 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0009199 ribonucleoside triphosphate metabolic process 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0009144 purine nucleoside triphosphate metabolic process 2.46% (5/203) 4.22 1e-06 2.8e-05
GO:0009141 nucleoside triphosphate metabolic process 2.46% (5/203) 4.0 3e-06 8.9e-05
GO:0098660 inorganic ion transmembrane transport 3.45% (7/203) 3.21 4e-06 0.000101
GO:0098662 inorganic cation transmembrane transport 3.45% (7/203) 3.21 4e-06 0.000101
GO:0003674 molecular_function 56.65% (115/203) 0.45 5e-06 0.000122
GO:0098655 cation transmembrane transport 3.45% (7/203) 3.13 7e-06 0.000143
GO:0015078 proton transmembrane transporter activity 2.96% (6/203) 3.27 1.6e-05 0.000335
GO:0046034 ATP metabolic process 2.96% (6/203) 3.17 2.6e-05 0.000514
GO:0009152 purine ribonucleotide biosynthetic process 2.46% (5/203) 3.49 3.5e-05 0.000611
GO:0009260 ribonucleotide biosynthetic process 2.46% (5/203) 3.49 3.5e-05 0.000611
GO:0046390 ribose phosphate biosynthetic process 2.46% (5/203) 3.49 3.5e-05 0.000611
GO:0034654 nucleobase-containing compound biosynthetic process 4.43% (9/203) 2.37 3.8e-05 0.000642
GO:0009117 nucleotide metabolic process 3.94% (8/203) 2.4 9.1e-05 0.001455
GO:0006164 purine nucleotide biosynthetic process 2.46% (5/203) 3.22 0.000103 0.001592
GO:0006753 nucleoside phosphate metabolic process 3.94% (8/203) 2.36 0.000113 0.00169
GO:1901293 nucleoside phosphate biosynthetic process 2.96% (6/203) 2.82 0.000121 0.0017
GO:0009165 nucleotide biosynthetic process 2.96% (6/203) 2.82 0.000121 0.0017
GO:0072522 purine-containing compound biosynthetic process 2.46% (5/203) 3.11 0.000161 0.002182
GO:0003954 NADH dehydrogenase activity 1.48% (3/203) 4.07 0.000338 0.003962
GO:0050136 NADH dehydrogenase (quinone) activity 1.48% (3/203) 4.07 0.000338 0.003962
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 1.48% (3/203) 4.07 0.000338 0.003962
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.48% (3/203) 4.07 0.000338 0.003962
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.48% (3/203) 4.07 0.000338 0.003962
GO:0034220 ion transmembrane transport 3.45% (7/203) 2.25 0.0005 0.005716
GO:0019438 aromatic compound biosynthetic process 4.93% (10/203) 1.74 0.000664 0.007204
GO:0016209 antioxidant activity 1.97% (4/203) 3.17 0.000651 0.007248
GO:0016651 oxidoreductase activity, acting on NAD(P)H 1.48% (3/203) 3.75 0.000817 0.008645
GO:0006796 phosphate-containing compound metabolic process 4.93% (10/203) 1.68 0.000945 0.009766
GO:0006793 phosphorus metabolic process 4.93% (10/203) 1.66 0.001058 0.010679
GO:1901137 carbohydrate derivative biosynthetic process 2.96% (6/203) 2.27 0.001204 0.011879
GO:0009063 cellular amino acid catabolic process 0.99% (2/203) 4.49 0.001978 0.015895
GO:1901606 alpha-amino acid catabolic process 0.99% (2/203) 4.49 0.001978 0.015895
GO:0015252 proton channel activity 0.99% (2/203) 4.49 0.001978 0.015895
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 0.99% (2/203) 4.49 0.001978 0.015895
GO:0005261 cation channel activity 0.99% (2/203) 4.49 0.001978 0.015895
GO:0004129 cytochrome-c oxidase activity 0.99% (2/203) 4.49 0.001978 0.015895
GO:0016675 oxidoreductase activity, acting on a heme group of donors 0.99% (2/203) 4.49 0.001978 0.015895
GO:0018130 heterocycle biosynthetic process 4.93% (10/203) 1.52 0.002197 0.016162
GO:0022857 transmembrane transporter activity 11.33% (23/203) 0.91 0.002189 0.016381
GO:0005215 transporter activity 11.33% (23/203) 0.91 0.002189 0.016381
GO:0019637 organophosphate metabolic process 3.94% (8/203) 1.76 0.002132 0.016521
GO:0022890 inorganic cation transmembrane transporter activity 2.96% (6/203) 2.12 0.002105 0.016611
GO:0009150 purine ribonucleotide metabolic process 2.46% (5/203) 2.42 0.001899 0.017537
GO:0009259 ribonucleotide metabolic process 2.46% (5/203) 2.42 0.001899 0.017537
GO:0019693 ribose phosphate metabolic process 2.46% (5/203) 2.42 0.001899 0.017537
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 1.48% (3/203) 3.27 0.002674 0.019343
GO:0090407 organophosphate biosynthetic process 2.96% (6/203) 2.03 0.00294 0.020252
GO:0006163 purine nucleotide metabolic process 2.46% (5/203) 2.29 0.00292 0.020442
GO:1901362 organic cyclic compound biosynthetic process 4.93% (10/203) 1.47 0.00292 0.020774
GO:0072521 purine-containing compound metabolic process 2.46% (5/203) 2.22 0.003557 0.024123
GO:0055086 nucleobase-containing small molecule metabolic process 3.94% (8/203) 1.63 0.00381 0.025437
GO:0044281 small molecule metabolic process 8.37% (17/203) 1.02 0.003899 0.025642
GO:0019725 cellular homeostasis 1.48% (3/203) 3.07 0.004139 0.026809
GO:0051536 iron-sulfur cluster binding 3.45% (7/203) 1.74 0.004341 0.027302
GO:0051540 metal cluster binding 3.45% (7/203) 1.74 0.004341 0.027302
GO:0015318 inorganic molecular entity transmembrane transporter activity 2.96% (6/203) 1.86 0.005321 0.032987
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 0.99% (2/203) 3.9 0.005758 0.03471
GO:0051920 peroxiredoxin activity 0.99% (2/203) 3.9 0.005758 0.03471
GO:0042592 homeostatic process 1.48% (3/203) 2.9 0.006006 0.035706
GO:0008324 cation transmembrane transporter activity 2.96% (6/203) 1.79 0.006935 0.040671
GO:0006812 cation transport 3.45% (7/203) 1.57 0.008492 0.049142
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_2 0.031 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_6 0.034 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.03 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_11 0.059 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_14 0.036 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_10 0.035 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_31 0.029 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_5 0.034 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_8 0.028 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_15 0.03 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_25 0.029 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.063 OrthoFinder Compare
Escherichia coli HCCA Cluster_2 0.035 OrthoFinder Compare
Escherichia coli HCCA Cluster_3 0.029 OrthoFinder Compare
Escherichia coli HCCA Cluster_5 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_6 0.127 OrthoFinder Compare
Escherichia coli HCCA Cluster_14 0.054 OrthoFinder Compare
Escherichia coli HCCA Cluster_22 0.08 OrthoFinder Compare
Escherichia coli HCCA Cluster_25 0.046 OrthoFinder Compare
Escherichia coli HCCA Cluster_30 0.092 OrthoFinder Compare
Escherichia coli HCCA Cluster_42 0.035 OrthoFinder Compare
Escherichia coli HCCA Cluster_47 0.029 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_3 0.047 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_5 0.074 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.031 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_13 0.029 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_7 0.038 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_3 0.045 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_5 0.045 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.052 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_16 0.049 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_19 0.033 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_21 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_25 0.027 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_29 0.096 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_30 0.081 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_33 0.042 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_36 0.038 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_40 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_47 0.03 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_7 0.032 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_8 0.041 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_14 0.027 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_20 0.031 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_26 0.035 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_1 0.058 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_2 0.048 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_12 0.03 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_17 0.044 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_5 0.033 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_14 0.043 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_18 0.039 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_19 0.031 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_21 0.038 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.08 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_24 0.051 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_47 0.038 OrthoFinder Compare
Salmonella enterica HCCA Cluster_30 0.039 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_4 0.037 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_11 0.086 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_12 0.058 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_19 0.028 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_3 0.034 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_6 0.032 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_14 0.032 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_2 0.048 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_12 0.037 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_5 0.027 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_9 0.041 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_12 0.028 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_16 0.102 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_17 0.034 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_27 0.035 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_33 0.044 OrthoFinder Compare
Sequences (203) (download table)

InterPro Domains

GO Terms

Family Terms