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Aliases : STM0547, fimH
Description : minor fimbrial subunit [Ensembl]. Fimbrial protein [Interproscan].
Gene families : OG_02_0001608 (OrthoFinder) Phylogenetic Tree(s): OG0001608_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL19501 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73635 | sfmH, b0533 | FimA homolog, function unknown [Ensembl]. Fimbrial... | 0.07 | OrthoFinder | |
| AAC74027 | elfG, b0941 | putative fimbrial-like adhesin protein [Ensembl].... | 0.05 | OrthoFinder | |
| AAC76179 | yraK, b3145 | putative fimbrial-like adhesin protein [Ensembl].... | 0.09 | OrthoFinder | |
| AAL19138 | STM0174, stiH | putative fimbriae [Ensembl]. Fimbrial protein [Interproscan]. | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007155 | cell adhesion | IEA | Interproscan |
| CC | GO:0009289 | pilus | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0009297 | pilus assembly | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0015288 | porin activity | IEP | Enrichment |
| MF | GO:0015473 | fimbrial usher porin activity | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| MF | GO:0022829 | wide pore channel activity | IEP | Enrichment |
| BP | GO:0030030 | cell projection organization | IEP | Enrichment |
| BP | GO:0030031 | cell projection assembly | IEP | Enrichment |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0043711 | pilus organization | IEP | Enrichment |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Enrichment |
| BP | GO:0071555 | cell wall organization | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000259 | Adhesion_dom_fimbrial | 188 | 334 |
| No external refs found! |