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  5. AAL19636

AAL19636 (STM0692)


Aliases : STM0692

Description : putative LysR family transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19636
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AEA94928 OG1RF_12241 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT23403 N559_1659 putative DNA-binding transcriptional regulator... 0.04 OrthoFinder
AGT23447 N559_1705 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT24668 N559_3005, CysB transcriptional regulator CysB [Ensembl]. LysR substrate... 0.03 OrthoFinder
AGT26415 N559_4829 LysR family transcriptional regulator [Ensembl]. LysR... 0.07 OrthoFinder
AGT26618 N559_5041 putative LysR-family transcriptional regulator... 0.04 OrthoFinder
AHY40206 CJ8421_04960 putative transcriptional regulator (lysR family) protein... 0.03 OrthoFinder
CRO86371 oxyR_2 Morphology and auto-aggregation control protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015174 basic amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015179 L-amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015189 L-lysine transmembrane transporter activity IEP Enrichment
MF GO:0015661 L-lysine efflux transmembrane transporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0034639 L-amino acid efflux transmembrane transporter activity IEP Enrichment
BP GO:0042908 xenobiotic transport IEP Enrichment
BP GO:0042919 benzoate transport IEP Enrichment
MF GO:0042925 benzoate transmembrane transporter activity IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1902022 L-lysine transport IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
BP GO:1903401 L-lysine transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 3 61
IPR005119 LysR_subst-bd 86 282
No external refs found!