AAL20144 (STM1215, ycfS)

Aliases : STM1215, ycfS

Description : putative periplasmic protein [Ensembl]. LysM domain [Interproscan].

Gene families : OG_02_0000888 (OrthoFinder) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL20144
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC74197 ldtC, b1113 L,D-transpeptidase linking Lpp to murein [Ensembl]. LysM... 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR018392 LysM_dom 47 91
IPR041597 Ldt_C 244 310
IPR005490 LD_TPept_cat_dom 103 240
No external refs found!