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AAL20183 (STM1257)


Aliases : STM1257

Description : putative ABC transporter [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20183
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.08 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.09 OrthoFinder
AAK99995 spr1192, appC ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL22489 STM3628, dppC dipeptide transport protein 2 [Ensembl]. N-terminal TM... 0.03 OrthoFinder
AEA95054 opp2C, OG1RF_12367 ABC superfamily ATP binding cassette transporter, ABC... 0.07 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.05 OrthoFinder
AGT22121 N559_0302, NikC nickel transporter permease NikC [Ensembl].... 0.05 OrthoFinder
AGT23465 N559_1723 ABC transporter permease [Ensembl]. N-terminal TM domain... 0.05 OrthoFinder
AGT24127 N559_2434 putative ABC transport system permease protein... 0.04 OrthoFinder
AGT25117 N559_3466 putative ABC transport system permease component... 0.03 OrthoFinder
AGT25385 N559_3747 putative ABC transport system permease protein... 0.05 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.1 OrthoFinder
AKI50192 oppC, L2625_02358 oligopeptide ABC transporter, permease protein... 0.02 OrthoFinder
CCG26342 OppC Oligopeptide transport system permease protein OppC (TC... 0.03 OrthoFinder
CCL17023 oppC, BN171_1090004 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CPC32230 gsiD_1, ERS093114_00036 nickel transport system permease protein [Ensembl].... 0.02 OrthoFinder
CPC43619 oppC_1, ERS093114_00434 Oligopeptide transport system permease protein oppC... 0.02 OrthoFinder
CPC43895 oppC_2, ERS093114_00442 Oligopeptide transport system permease protein oppC... 0.04 OrthoFinder
CPC72124 opp-3C, ERS093114_01159 oligopeptide permease%2C channel-forming protein... 0.04 OrthoFinder
CPC95740 gsiD_2, ERS093114_01724 Oligopeptide transport system permease protein... 0.02 OrthoFinder
CRO33006 gsiD Glutathione transport system permease protein GsiD... 0.02 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.06 OrthoFinder
EDJ90655 CGSHi22421_04078 dipeptide transport system permease protein [Ensembl].... 0.02 OrthoFinder
EDJ90882 CGSHi22421_03498 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.05 OrthoFinder
KNA58585 VCV51_031122 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0015232 heme transmembrane transporter activity IEP Enrichment
BP GO:0015886 heme transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901678 iron coordination entity transport IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 84 262
No external refs found!