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Aliases : STM1263
Description : putative periplasmic protein [Ensembl]. ZinT (YodA) periplasmic lipocalin-like zinc-recruitment [Interproscan].
Gene families : OG_02_0000138 (OrthoFinder) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL20188 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC74927 | znuA, b1857 | zinc ABC transporter periplasmic binding protein... | 0.08 | OrthoFinder | |
| AGT23620 | N559_1887 | high-affinity zinc transporter periplasmic component [Ensembl]. | 0.08 | OrthoFinder | |
| AGT26612 | N559_5035 | hypothetical protein [Ensembl]. ZinT domain [InterProScan]. | 0.08 | OrthoFinder | |
| KNA59607 | VCV51_031393 | zinc ABC transporter [Ensembl]. Zinc-uptake complex... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
| MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
| MF | GO:0005539 | glycosaminoglycan binding | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Enrichment |
| CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0042834 | peptidoglycan binding | IEP | Enrichment |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015304 | ZinT_dom | 28 | 207 |
| No external refs found! |