Aliases : STM1279, yeaM
Description : putative regulator (AraC/XylS family) [Ensembl]. Helix-turn-helix domain, AraC-like ligand binding domain [Interproscan].
Gene families : OG_02_0000506 (OrthoFinder) Phylogenetic Tree(s): OG0000506_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL20204 | |
Cluster | HCCA: Cluster_5 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT24779 | N559_3117 | putative ARAC-type regulatory protein [Ensembl].... | 0.04 | OrthoFinder | |
CRP14840 | ripA_4 | HTH-type transcriptional repressor of iron proteins A... | 0.08 | OrthoFinder | |
CRP25841 | ripA_6 | HTH-type transcriptional repressor of iron proteins A... | 0.04 | OrthoFinder | |
KNA52289 | VCV51_033456 | AraC family Bacterial regulatory helix-turn-helix... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008144 | drug binding | IEP | Enrichment |
MF | GO:0008658 | penicillin binding | IEP | Enrichment |
MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
MF | GO:0033218 | amide binding | IEP | Enrichment |
MF | GO:0033293 | monocarboxylic acid binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
No external refs found! |