Aliases : STM1339, himA
Description : integration host factor (IHF), alpha subunit [Ensembl]. Bacterial DNA-binding protein [Interproscan].
Gene families : OG_02_0000100 (OrthoFinder) Phylogenetic Tree(s): OG0000100_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL20264 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC73998 | ihfB, b0912 | integration host factor (IHF), DNA-binding protein, beta... | 0.04 | OrthoFinder | |
AAC74782 | ihfA, b1712 | integration host factor (IHF), DNA-binding protein,... | 0.03 | OrthoFinder | |
AEA93956 | hup, OG1RF_11269 | DNA-binding protein HU [Ensembl]. Bacterial DNA-binding... | 0.02 | OrthoFinder | |
AHY40126 | CJ8421_04515 | DNA-binding protein HU-like protein [Ensembl]. Bacterial... | 0.02 | OrthoFinder | |
CPC76557 | hu, ERS093114_01239 | DNA-binding protein II HBsu [Ensembl]. Bacterial... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Enrichment |
MF | GO:0004826 | phenylalanine-tRNA ligase activity | IEP | Enrichment |
BP | GO:0006432 | phenylalanyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
BP | GO:0009268 | response to pH | IEP | Enrichment |
BP | GO:0009628 | response to abiotic stimulus | IEP | Enrichment |
BP | GO:0010447 | response to acidic pH | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
CC | GO:0018995 | host cellular component | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
CC | GO:0033643 | host cell part | IEP | Enrichment |
CC | GO:0033644 | host cell membrane | IEP | Enrichment |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
MF | GO:0043022 | ribosome binding | IEP | Enrichment |
CC | GO:0044384 | host outer membrane | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
BP | GO:0071214 | cellular response to abiotic stimulus | IEP | Enrichment |
BP | GO:0071467 | cellular response to pH | IEP | Enrichment |
BP | GO:0071468 | cellular response to acidic pH | IEP | Enrichment |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
BP | GO:0104004 | cellular response to environmental stimulus | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000119 | Hist_DNA-bd | 3 | 91 |
No external refs found! |