AAL20264 (STM1339, himA)

Aliases : STM1339, himA

Description : integration host factor (IHF), alpha subunit [Ensembl]. Bacterial DNA-binding protein [Interproscan].

Gene families : OG_02_0000100 (OrthoFinder) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL20264
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC73998 ihfB, b0912 integration host factor (IHF), DNA-binding protein, beta... 0.04 OrthoFinder
AAC74782 ihfA, b1712 integration host factor (IHF), DNA-binding protein,... 0.03 OrthoFinder
AEA93956 hup, OG1RF_11269 DNA-binding protein HU [Ensembl]. Bacterial DNA-binding... 0.02 OrthoFinder
AHY40126 CJ8421_04515 DNA-binding protein HU-like protein [Ensembl]. Bacterial... 0.02 OrthoFinder
CPC76557 hu, ERS093114_01239 DNA-binding protein II HBsu [Ensembl]. Bacterial... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009268 response to pH IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0010447 response to acidic pH IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033644 host cell membrane IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
CC GO:0044384 host outer membrane IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0071214 cellular response to abiotic stimulus IEP Enrichment
BP GO:0071467 cellular response to pH IEP Enrichment
BP GO:0071468 cellular response to acidic pH IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0104004 cellular response to environmental stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR000119 Hist_DNA-bd 3 91
No external refs found!