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  5. AAL20644

AAL20644 (STM1726, trpB)


Aliases : STM1726, trpB

Description : tryptophan synthase, beta protein [Ensembl]. Pyridoxal-phosphate dependent enzyme [Interproscan].


Gene families : OG_02_0000713 (OrthoFinder) Phylogenetic Tree(s): OG0000713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20644
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC74343 trpB, b1261 tryptophan synthase, beta subunit [Ensembl].... 0.09 OrthoFinder
AAL00435 spr1632, trpB Tryptophan synthase beta chain [Ensembl].... 0.04 OrthoFinder
AGT24682 N559_3019 tryptophan synthase subunit beta [Ensembl]. 0.13 OrthoFinder
AHY39604 CJ8421_01745 tryptophan synthase subunit beta [Ensembl].... 0.05 OrthoFinder
AKI49625 trpB, L2625_01735 tryptophan synthase, beta subunit [Ensembl].... 0.05 OrthoFinder
CCP44376 trpB, Rv1612 Tryptophan synthase, beta subunit TrpB [Ensembl].... 0.04 OrthoFinder
CPC32444 trpB, ERS093114_00044 Tryptophan synthase beta chain [Ensembl].... 0.13 OrthoFinder
CRP69095 trpB Tryptophan synthase beta chain [Ensembl].... 0.03 OrthoFinder
EDJ91074 CGSHi22421_10047 tryptophan synthase subunit beta [Ensembl].... 0.1 OrthoFinder
KNA53895 VCV51_030824 tryptophan synthase [Ensembl]. Pyridoxal-phosphate... 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0004068 aspartate 1-decarboxylase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006522 alanine metabolic process IEP Enrichment
BP GO:0006523 alanine biosynthetic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009078 pyruvate family amino acid metabolic process IEP Enrichment
BP GO:0009079 pyruvate family amino acid biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001926 PLP-dep 52 375
No external refs found!