AAL20862 (STM1950, sdiA)

Aliases : STM1950, sdiA

Description : transcriptional regulator of ftsQAZ gene cluster [Ensembl]. Autoinducer binding domain, Bacterial regulatory proteins [Interproscan].

Gene families : OG_02_0001636 (OrthoFinder) Phylogenetic Tree(s): OG0001636_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL20862
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method	Actions
AGT23578	N559_1845, SdiA	DNA-binding transcriptional activator SdiA [Ensembl]....	0.03	OrthoFinder
CRP58504	lasR_1	Transcriptional activator protein LasR [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001539	cilium or flagellum-dependent cell motility	IEP	Enrichment
BP	GO:0006012	galactose metabolic process	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0006935	chemotaxis	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0008108	UDP-glucose:hexose-1-phosphate uridylyltransferase activity	IEP	Enrichment
MF	GO:0008733	L-arabinose isomerase activity	IEP	Enrichment
CC	GO:0009424	bacterial-type flagellum hook	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016597	amino acid binding	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
BP	GO:0032774	RNA biosynthetic process	IEP	Enrichment
MF	GO:0034618	arginine binding	IEP	Enrichment
BP	GO:0040011	locomotion	IEP	Enrichment
BP	GO:0042330	taxis	IEP	Enrichment
MF	GO:0043177	organic acid binding	IEP	Enrichment
BP	GO:0048870	cell motility	IEP	Enrichment
MF	GO:0070569	uridylyltransferase activity	IEP	Enrichment
BP	GO:0071973	bacterial-type flagellum-dependent cell motility	IEP	Enrichment
BP	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005143	TF_LuxR_autoind-bd_dom	23	160
IPR000792	Tscrpt_reg_LuxR_C	179	234

External Links

No external refs found!

AAL20862 (STM1950, sdiA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation