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Aliases : STM2089, rfbJ
Description : CDP-abequose synthase [Ensembl]. NAD dependent epimerase/dehydratase family [Interproscan].
Gene families : OG_02_0000257 (OrthoFinder) Phylogenetic Tree(s): OG0000257_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL20993 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAK99126 | spr0322, cpsN | dTDP-glucose-4,6-dehydratase [Ensembl]. GDP-mannose 4... | 0.04 | OrthoFinder | |
| AEA94419 | rmlB, OG1RF_11732 | dTDP glucose 4,6-dehydratase [Ensembl]. GDP-mannose 4... | 0.02 | OrthoFinder | |
| AHY40342 | CJ8421_05650 | hypothetical protein [Ensembl]. GDP-mannose 4 [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Enrichment |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006304 | DNA modification | IEP | Enrichment |
| BP | GO:0006305 | DNA alkylation | IEP | Enrichment |
| BP | GO:0006306 | DNA methylation | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008378 | galactosyltransferase activity | IEP | Enrichment |
| BP | GO:0008653 | lipopolysaccharide metabolic process | IEP | Enrichment |
| MF | GO:0008830 | dTDP-4-dehydrorhamnose 3,5-epimerase activity | IEP | Enrichment |
| MF | GO:0008918 | lipopolysaccharide 3-alpha-galactosyltransferase activity | IEP | Enrichment |
| BP | GO:0009103 | lipopolysaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0016485 | protein processing | IEP | Enrichment |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0035250 | UDP-galactosyltransferase activity | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | Enrichment |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Enrichment |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001509 | Epimerase_deHydtase | 8 | 229 |
| No external refs found! |