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Aliases : STM2267, ompC
Description : outer membrane protein 1b (ib;c) [Ensembl]. Gram-negative porin [Interproscan].
Gene families : OG_02_0000308 (OrthoFinder) Phylogenetic Tree(s): OG0000308_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL21169 | |
| Cluster | HCCA: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75275 | ompC, b2215 | outer membrane porin protein C [Ensembl]. Gram-negative... | 0.03 | OrthoFinder | |
| EDJ90293 | nagA, CGSHi22421_09537 | N-acetylglucosamine-6-phosphate deacetylase [Ensembl].... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009279 | cell outer membrane | IEA | Interproscan |
| MF | GO:0015288 | porin activity | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0034220 | ion transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | Enrichment |
| BP | GO:0006739 | NADP metabolic process | IEP | Enrichment |
| BP | GO:0006740 | NADPH regeneration | IEP | Enrichment |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Enrichment |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Enrichment |
| BP | GO:0006879 | cellular iron ion homeostasis | IEP | Enrichment |
| BP | GO:0007154 | cell communication | IEP | Enrichment |
| BP | GO:0007267 | cell-cell signaling | IEP | Enrichment |
| MF | GO:0008199 | ferric iron binding | IEP | Enrichment |
| BP | GO:0009267 | cellular response to starvation | IEP | Enrichment |
| BP | GO:0009372 | quorum sensing | IEP | Enrichment |
| BP | GO:0009595 | detection of biotic stimulus | IEP | Enrichment |
| BP | GO:0009605 | response to external stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| BP | GO:0009991 | response to extracellular stimulus | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Enrichment |
| BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
| BP | GO:0023052 | signaling | IEP | Enrichment |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Enrichment |
| MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
| BP | GO:0031667 | response to nutrient levels | IEP | Enrichment |
| BP | GO:0031668 | cellular response to extracellular stimulus | IEP | Enrichment |
| BP | GO:0031669 | cellular response to nutrient levels | IEP | Enrichment |
| BP | GO:0042594 | response to starvation | IEP | Enrichment |
| MF | GO:0043768 | S-ribosylhomocysteine lyase activity | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| BP | GO:0048878 | chemical homeostasis | IEP | Enrichment |
| BP | GO:0050801 | ion homeostasis | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Enrichment |
| BP | GO:0051259 | protein complex oligomerization | IEP | Enrichment |
| BP | GO:0051262 | protein tetramerization | IEP | Enrichment |
| BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| BP | GO:0055065 | metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055072 | iron ion homeostasis | IEP | Enrichment |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055080 | cation homeostasis | IEP | Enrichment |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Enrichment |
| BP | GO:0060245 | detection of cell density | IEP | Enrichment |
| BP | GO:0071496 | cellular response to external stimulus | IEP | Enrichment |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001702 | Porin_Gram-ve | 27 | 378 |
| No external refs found! |