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Aliases : STM2515, ratA
Description : putative outer membrane protein [Ensembl]. Salmonella repeat of unknown function (DUF823), Salmonella repeat of unknown function (DUF824) [Interproscan].
Gene families : OG_02_0016159 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL21409 | |
| Cluster | HCCA: Cluster_36 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003796 | lysozyme activity | IEP | Enrichment |
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| BP | GO:0007155 | cell adhesion | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
| CC | GO:0009289 | pilus | IEP | Enrichment |
| BP | GO:0009297 | pilus assembly | IEP | Enrichment |
| BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015288 | porin activity | IEP | Enrichment |
| MF | GO:0015473 | fimbrial usher porin activity | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0022610 | biological adhesion | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022829 | wide pore channel activity | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0030030 | cell projection organization | IEP | Enrichment |
| BP | GO:0030031 | cell projection assembly | IEP | Enrichment |
| CC | GO:0042995 | cell projection | IEP | Enrichment |
| BP | GO:0043711 | pilus organization | IEP | Enrichment |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008542 | DUF824 | 213 | 258 |
| IPR008542 | DUF824 | 480 | 519 |
| IPR008542 | DUF824 | 1585 | 1629 |
| IPR008542 | DUF824 | 1304 | 1348 |
| IPR008542 | DUF824 | 740 | 783 |
| IPR008542 | DUF824 | 1015 | 1059 |
| IPR008541 | DUF823 | 811 | 991 |
| IPR008541 | DUF823 | 1383 | 1567 |
| IPR008541 | DUF823 | 1094 | 1284 |
| IPR008541 | DUF823 | 1680 | 1862 |
| IPR008541 | DUF823 | 282 | 460 |
| IPR008541 | DUF823 | 547 | 721 |
| No external refs found! |