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Aliases : STM2665, yfiA
Description : ribosome associated factor [Ensembl]. Sigma 54 modulation protein / S30EA ribosomal protein [Interproscan].
Gene families : OG_02_0000405 (OrthoFinder) Phylogenetic Tree(s): OG0000405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL21554 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75646 | raiA, b2597 | cold shock protein associated with 30S ribosomal subunit... | 0.11 | OrthoFinder | |
| AAC76235 | hpf, b3203 | ribosome hibernation promoting factor HPF; stabilizes... | 0.03 | OrthoFinder | |
| AGT22352 | N559_0554 | putative sigma(54) modulation protein [Ensembl]. | 0.06 | OrthoFinder | |
| AGT23098 | N559_1336 | sigma-54 modulation protein [Ensembl]. | 0.08 | OrthoFinder | |
| EDJ90836 | CGSHi22421_05405 | hypothetical protein [Ensembl]. Sigma 54 modulation... | 0.03 | OrthoFinder | |
| KNA57477 | VCV51_032853 | sigma 54 modulation protein/S30EA ribosomal protein... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0044238 | primary metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000910 | cytokinesis | IEP | Enrichment |
| BP | GO:0002376 | immune system process | IEP | Enrichment |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| BP | GO:0006955 | immune response | IEP | Enrichment |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Enrichment |
| BP | GO:0009307 | DNA restriction-modification system | IEP | Enrichment |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Enrichment |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
| MF | GO:0016662 | oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Enrichment |
| BP | GO:0022402 | cell cycle process | IEP | Enrichment |
| BP | GO:0022414 | reproductive process | IEP | Enrichment |
| BP | GO:0032506 | cytokinetic process | IEP | Enrichment |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | Enrichment |
| BP | GO:0032955 | regulation of division septum assembly | IEP | Enrichment |
| MF | GO:0042279 | nitrite reductase (cytochrome, ammonia-forming) activity | IEP | Enrichment |
| BP | GO:0043093 | FtsZ-dependent cytokinesis | IEP | Enrichment |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Enrichment |
| BP | GO:0044355 | clearance of foreign intracellular DNA | IEP | Enrichment |
| BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
| BP | GO:0090529 | cell septum assembly | IEP | Enrichment |
| BP | GO:0098542 | defense response to other organism | IEP | Enrichment |
| MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
| BP | GO:0099046 | clearance of foreign intracellular nucleic acids | IEP | Enrichment |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003489 | RHF/RaiA | 4 | 91 |
| No external refs found! |