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  5. AAL21795

AAL21795 (STM2915, ygbM)


Aliases : STM2915, ygbM

Description : putative endonuclease [Ensembl]. Xylose isomerase-like TIM barrel [Interproscan].


Gene families : OG_02_0001224 (OrthoFinder) Phylogenetic Tree(s): OG0001224_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AAL21795
Cluster HCCA:
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    4. Sequence
    5. AAL19210

    AAL19210 (STM0247, abc)Cluster_38

    Target Alias Description ECC score Gene Family Method Actions
    AAC73610 hyi, b0508 hydroxypyruvate isomerase [Ensembl]. Xylose... 0.1 OrthoFinder
    AAC75781 ygbM, b2739 putative hydroxypyruvate isomerase [Ensembl]. Xylose... 0.1 OrthoFinder
    AAL19472 STM0518, gip glyoxylate-induced protein [Ensembl]. Xylose... 0.06 OrthoFinder
    CRP67367 hyi Hydroxypyruvate isomerase [Ensembl]. Xylose... 0.07 OrthoFinder
    EDJ91814 CGSHi22421_08663 hypothetical protein [Ensembl]. Xylose isomerase-like... 0.26 OrthoFinder
    EDJ91815 CGSHi22421_08668 hypothetical protein [Ensembl]. Xylose isomerase-like... 0.28 OrthoFinder

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0005488 binding IEP Enrichment
    BP GO:0006082 organic acid metabolic process IEP Enrichment
    BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
    BP GO:0006525 arginine metabolic process IEP Enrichment
    BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
    MF GO:0015128 gluconate transmembrane transporter activity IEP Enrichment
    BP GO:0015718 monocarboxylic acid transport IEP Enrichment
    MF GO:0016597 amino acid binding IEP Enrichment
    MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
    BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
    MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
    MF GO:0031406 carboxylic acid binding IEP Enrichment
    MF GO:0034618 arginine binding IEP Enrichment
    BP GO:0035429 gluconate transmembrane transport IEP Enrichment
    MF GO:0036094 small molecule binding IEP Enrichment
    BP GO:0042873 aldonate transmembrane transport IEP Enrichment
    MF GO:0042879 aldonate transmembrane transporter activity IEP Enrichment
    MF GO:0043177 organic acid binding IEP Enrichment
    BP GO:0043436 oxoacid metabolic process IEP Enrichment
    MF GO:0050661 NADP binding IEP Enrichment
    BP GO:0051259 protein complex oligomerization IEP Enrichment
    BP GO:0098656 anion transmembrane transport IEP Enrichment
    InterPro domains Description Start Stop
    IPR013022 Xyl_isomerase-like_TIM-brl 21 219
    No external refs found!