AAL22169 (STM3299, greA)


Aliases : STM3299, greA

Description : transcription elongation factor [Ensembl]. Transcription elongation factor [Interproscan].


Gene families : OG_02_0000172 (OrthoFinder) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22169
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AGT22191 N559_0378, GreB transcription elongation factor GreB [Ensembl]. 0.04 OrthoFinder
EDJ91118 greA, CGSHi22421_10267 transcription elongation factor GreA [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0032784 regulation of DNA-templated transcription, elongation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006935 chemotaxis IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0042330 taxis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR001437 Tscrpt_elong_fac_GreA/B_C 83 157
IPR022691 Tscrpt_elong_fac_GreA/B_N 4 74
No external refs found!