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  5. CCL19022

CCL19022 (rpmB, BN171_2800001)


Aliases : rpmB, BN171_2800001

Description : 50S ribosomal protein L28 [Ensembl]. Ribosomal L28 family [Interproscan].


Gene families : OG_02_0000360 (OrthoFinder) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19022
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC76661 rpmB, b3637 50S ribosomal subunit protein L28 [Ensembl]. Ribosomal... 0.04 OrthoFinder
AAK99202 spr0398, rpmB 50S Ribosomal protein L28 [Ensembl]. Ribosomal L28... 0.03 OrthoFinder
AAL22587 STM3728, rpmB 50S ribosomal subunit protein L28 [Ensembl]. Ribosomal... 0.05 OrthoFinder
ADK86749 rpmB, MPNE_0729 ribosomal protein L28 [Ensembl]. Ribosomal L28 family... 0.03 OrthoFinder
AEA95067 rpmB2, OG1RF_12380 50S ribosomal protein L28 [Ensembl]. Ribosomal L28... 0.05 OrthoFinder
AGT21993 N559_0170 50S ribosomal protein L28 [Ensembl]. 0.04 OrthoFinder
CPC36291 rpmB, ERS093114_00200 50S ribosomal protein L28 [Ensembl]. Ribosomal L28... 0.03 OrthoFinder
CRO28155 rpmB 50S ribosomal protein L28 [Ensembl]. Ribosomal L28... 0.03 OrthoFinder
KNA52491 VCV51_030149 ribosomal protein L28 [Ensembl]. Ribosomal L28 family... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
InterPro domains Description Start Stop
IPR026569 Ribo_L28/L24 3 58
UniProtKB U3WYD0