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  5. AAL22285

AAL22285 (STM3422, rpmD)


Aliases : STM3422, rpmD

Description : 50S ribosomal subunit protein L30 [Ensembl]. Ribosomal protein L30p/L7e [Interproscan].


Gene families : OG_02_0000682 (OrthoFinder) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22285

Target Alias Description ECC score Gene Family Method Actions
AAC76327 rpmD, b3302 50S ribosomal subunit protein L30 [Ensembl]. Ribosomal... 0.41 OrthoFinder
AAK99011 spr0207, rpmD 50S Ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
AEA92856 rpmD, OG1RF_10169 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
AGT22260 N559_0452 ribosomal protein L30 [Ensembl]. ferredoxin-like fold... 0.12 OrthoFinder
AKI50549 rpmD, L2625_02759 ribosomal protein L30 [Ensembl]. Ribosomal protein L30... 0.07 OrthoFinder
AKP15140 rpmD, WX61_01086 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
CCG27397 No alias LSU ribosomal protein L30p (L7e) [Ensembl]. Ribosomal... 0.11 OrthoFinder
CCP43466 rpmD, Rv0722 50S ribosomal protein L30 RpmD [Ensembl]. Ribosomal... 0.21 OrthoFinder
CPD14133 rpmD, ERS093114_02140 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.35 OrthoFinder
CRO74278 rpmD 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
EDJ91374 rpmD, CGSHi22421_04703 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR016082 Ribosomal_L30_ferredoxin-like 5 55
No external refs found!