AAL22744 (STM3886, rbsR)

Aliases : STM3886, rbsR

Description : transcriptional repressor for rbs operon (GalR/LacI family) [Ensembl]. Bacterial regulatory proteins, Periplasmic binding protein-like domain [Interproscan].

Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL22744
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC75212 galS, b2151 galactose-and fucose-inducible galactose regulon... 0.07 OrthoFinder
AAC76776 rbsR, b3753 transcriptional repressor of ribose metabolism... 0.13 OrthoFinder
AAC76916 cytR, b3934 Anti-activator for CytR-CRP nucleoside utilization... 0.08 OrthoFinder
AAL00724 spr1922, malR Maltose operon transcriptional repressor [Ensembl].... 0.02 OrthoFinder
AAL21095 STM2191, galS GalR/LacI family transcriptional repressor of mgl operon... 0.04 OrthoFinder
AGT22061 N559_0239 putative transcriptional regulator [Ensembl].... 0.03 OrthoFinder
AGT22772 N559_0986 putative transcriptional regulator [Ensembl].... 0.06 OrthoFinder
AGT22777 N559_0991, GalR DNA-binding transcriptional regulator GalR [Ensembl].... 0.07 OrthoFinder
AGT22953 N559_1185 ascBF operon repressor [Ensembl]. Periplasmic binding... 0.04 OrthoFinder
AGT25335 N559_3695 putative periplasmic binding protein/LacI... 0.05 OrthoFinder
AGT25422 N559_3786 transcriptional regulator, LacI family [Ensembl].... 0.03 OrthoFinder
AGT26627 N559_5050, CytR DNA-binding transcriptional regulator CytR [Ensembl].... 0.04 OrthoFinder
AGT26654 N559_5077 repressor of galETK operon [Ensembl]. Periplasmic... 0.04 OrthoFinder
AGT26694 N559_5120 ribose operon repressor [Ensembl]. Periplasmic binding... 0.11 OrthoFinder
AKI48007 L2625_00032 transcriptional regulator, LacI family [Ensembl].... 0.04 OrthoFinder
AKI48222 L2625_00274 transcriptional regulator [Ensembl]. LacI-type HTH... 0.03 OrthoFinder
AKI48687 L2625_00756 LacI family transcription regulator [Ensembl]. LacI-type... 0.04 OrthoFinder
CCG27166 No alias Catabolite control protein A [Ensembl]. Bacterial... 0.03 OrthoFinder
CPC79767 malR, ERS093114_01340 Maltose operon transcriptional repressor MalR%2C LacI... 0.04 OrthoFinder
CRN86478 rbsR Ribose operon repressor [Ensembl]. Bacterial regulatory... 0.04 OrthoFinder
EDJ91402 CGSHi22421_04843 HTH-type transcriptional regulator GalR [Ensembl].... 0.03 OrthoFinder
EDJ91486 CGSHi22421_06942 hypothetical protein [Ensembl]. Bacterial regulatory... 0.03 OrthoFinder
KNA60659 VCV51_032098 lacI family Bacterial regulatory protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004340 glucokinase activity IEP Enrichment
MF GO:0004396 hexokinase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005536 glucose binding IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000843 HTH_LacI 1 45
No external refs found!