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  5. AAL23080

AAL23080 (STM4256, ssb)


Aliases : STM4256, ssb

Description : ssDNA-binding protein [Ensembl]. Single-strand binding protein family [Interproscan].


Gene families : OG_02_0000128 (OrthoFinder) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL23080
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AAC77029 ssb, b4059 single-stranded DNA-binding protein [Ensembl].... 0.04 OrthoFinder
AGT26436 N559_4852 single-stranded DNA-binding protein [Ensembl].... 0.11 OrthoFinder
AGT26898 N559_5324 single-strand binding family protein [Ensembl].... 0.03 OrthoFinder
EDJ90843 CGSHi22421_05440 dihydrodipicolinate synthase [Ensembl]. Single-strand... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004568 chitinase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006030 chitin metabolic process IEP Enrichment
BP GO:0006032 chitin catabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008309 double-stranded DNA exodeoxyribonuclease activity IEP Enrichment
MF GO:0008409 5'-3' exonuclease activity IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009432 SOS response IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
BP GO:0019076 viral release from host cell IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019835 cytolysis IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Enrichment
BP GO:0035890 exit from host IEP Enrichment
BP GO:0035891 exit from host cell IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044403 biological process involved in symbiotic interaction IEP Enrichment
BP GO:0046348 amino sugar catabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
BP GO:0051701 biological process involved in interaction with host IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0051782 negative regulation of cell division IEP Enrichment
MF GO:0051908 double-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Enrichment
BP GO:0052126 movement in host environment IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901071 glucosamine-containing compound metabolic process IEP Enrichment
BP GO:1901072 glucosamine-containing compound catabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 6 107
No external refs found!