1. Home
  2. Species
  3. Salmonella enterica
  4. Sequence
  5. AAL23342

AAL23342 (STM4524, hsdS)


Aliases : STM4524, hsdS

Description : specificity determinant for hsdM and hsdR [Ensembl]. Type I restriction modification DNA specificity domain [Interproscan].


Gene families : OG_02_0000928 (OrthoFinder) Phylogenetic Tree(s): OG0000928_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL23342
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AAC77304 hsdS, b4348 specificity determinant for hsdM and hsdR [Ensembl].... 0.08 OrthoFinder
AHY40725 CJ8421_07755 Type I restriction-modification system, specificity... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006304 DNA modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008378 galactosyltransferase activity IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
MF GO:0008918 lipopolysaccharide 3-alpha-galactosyltransferase activity IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035250 UDP-galactosyltransferase activity IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000055 Restrct_endonuc_typeI_TRD 7 187
IPR000055 Restrct_endonuc_typeI_TRD 225 409
No external refs found!