CCL19137 (BN171_2880004)

Aliases : BN171_2880004

Description : Transcriptional regulator, LysR family [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL19137
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AAC75049 cbl, b1987 ssuEADCB/tauABCD operon transcriptional activator... 0.04 OrthoFinder
AAC75458 xapR, b2405 transcriptional activator of xapAB [Ensembl]. LysR... 0.03 OrthoFinder
AGT22920 N559_1151 putative LysR-family transcriptional regulator... 0.04 OrthoFinder
AGT23403 N559_1659 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AGT25969 N559_4359 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
AKI48437 L2625_00496 transcriptional regulator, LysR family [Ensembl].... 0.03 OrthoFinder
AKI50144 L2625_02308 transcriptional regulator, LysR family [Ensembl]. LysR,... 0.03 OrthoFinder
CRO72266 cynR_2 Cyn operon transcriptional activator [Ensembl]. LysR... 0.03 OrthoFinder
CRO80200 cynR_3 Cyn operon transcriptional activator [Ensembl]. LysR... 0.04 OrthoFinder
CRO86371 oxyR_2 Morphology and auto-aggregation control protein... 0.02 OrthoFinder
CRP00540 cysL_3 CysJI operon transcriptional activator [Ensembl]. LysR... 0.02 OrthoFinder
CRP03013 gltC_5 HTH-type transcriptional regulator GltC [Ensembl]. LysR... 0.03 OrthoFinder
KNA59752 VCV51_032447 lysR family Bacterial regulatory helix-turn-helix... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 91 291
IPR000847 Tscrpt_reg_HTH_LysR 3 64
UniProtKB U3WYR1