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CPC36291 (rpmB, ERS093114_00200)


Aliases : rpmB, ERS093114_00200

Description : 50S ribosomal protein L28 [Ensembl]. Ribosomal L28 family [Interproscan].


Gene families : OG_02_0000360 (OrthoFinder) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC36291
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
CCG26372 No alias LSU ribosomal protein L28p [Ensembl]. Ribosomal L28... 0.03 OrthoFinder
CCL19022 rpmB, BN171_2800001 50S ribosomal protein L28 [Ensembl]. Ribosomal L28... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046677 response to antibiotic IEP Enrichment
InterPro domains Description Start Stop
IPR026569 Ribo_L28/L24 3 58
No external refs found!