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  5. CPC43895

CPC43895 (oppC_2, ERS093114_00442)


Aliases : oppC_2, ERS093114_00442

Description : Oligopeptide transport system permease protein oppC [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC43895
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC73919 gsiD, b0832 glutathione ABC transporter permease [Ensembl].... 0.12 OrthoFinder
AAC74327 oppC, b1245 oligopeptide ABC transporter permease [Ensembl].... 0.21 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.17 OrthoFinder
AAC74558 ddpC, b1485 D,D-dipeptide ABC transporter permease [Ensembl].... 0.12 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.1 OrthoFinder
AAL00508 spr1705, amiD ABC transporter membrane-spanning permease-oligopeptide... 0.03 OrthoFinder
AAL19787 STM0851, yliD putative ABC transporter inner membrane component... 0.04 OrthoFinder
AAL20183 STM1257 putative ABC transporter [Ensembl].... 0.04 OrthoFinder
AAL20662 STM1744, oppC oligopeptide transport protein [Ensembl]. N-terminal TM... 0.05 OrthoFinder
AAL22489 STM3628, dppC dipeptide transport protein 2 [Ensembl]. N-terminal TM... 0.04 OrthoFinder
AEA93324 opp1C, OG1RF_10637 oligopeptide ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AEA95054 opp2C, OG1RF_12367 ABC superfamily ATP binding cassette transporter, ABC... 0.1 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.06 OrthoFinder
AGT22121 N559_0302, NikC nickel transporter permease NikC [Ensembl].... 0.02 OrthoFinder
AGT23465 N559_1723 ABC transporter permease [Ensembl]. N-terminal TM domain... 0.04 OrthoFinder
AGT23804 N559_2086 oligopeptide transport permease protein [Ensembl].... 0.04 OrthoFinder
AGT23970 N559_2267 oligopeptide ABC transport system permease component... 0.1 OrthoFinder
AGT24127 N559_2434 putative ABC transport system permease protein... 0.05 OrthoFinder
AGT24649 N559_2985 peptide transport permease protein [Ensembl]. N-terminal... 0.02 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.11 OrthoFinder
AKI50192 oppC, L2625_02358 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
CBI66819 dppC, HPB8_1262 dipeptide ABC transporter, permease protein (DppC)... 0.07 OrthoFinder
CCG26342 OppC Oligopeptide transport system permease protein OppC (TC... 0.03 OrthoFinder
CPC32230 gsiD_1, ERS093114_00036 nickel transport system permease protein [Ensembl].... 0.03 OrthoFinder
CPC43619 oppC_1, ERS093114_00434 Oligopeptide transport system permease protein oppC... 0.02 OrthoFinder
CPC72124 opp-3C, ERS093114_01159 oligopeptide permease%2C channel-forming protein... 0.05 OrthoFinder
CPD17831 opp-1C, ERS093114_02218 Oligopeptide transporter putative membrane permease... 0.07 OrthoFinder
CRO33006 gsiD Glutathione transport system permease protein GsiD... 0.02 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.1 OrthoFinder
EDJ90655 CGSHi22421_04078 dipeptide transport system permease protein [Ensembl].... 0.02 OrthoFinder
EDJ90882 CGSHi22421_03498 peptide ABC transporter permease protein [Ensembl].... 0.02 OrthoFinder
EDJ91925 oppD, CGSHi22421_09218 oligopeptide transporter ATP-binding component... 0.07 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.06 OrthoFinder
KNA52460 VCV51_030124 binding-protein-dependent transport system inner... 0.12 OrthoFinder
KNA54679 VCV51_030765 binding-protein-dependent transport system inner... 0.05 OrthoFinder
KNA58585 VCV51_031122 binding-protein-dependent transport system inner... 0.02 OrthoFinder
KNA60554 VCV51_032225 binding-protein-dependent transport system inner... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR025966 OppC_N 51 101
IPR000515 MetI-like 172 356
No external refs found!